I think there were some discussions on one of the sites about relocating the knock sensor ground; if I recall some system go frame to negative and some go motor to frame [to negative], and some systems gang with other grounds possibly getting some interference. The shields are also mentioned in some where changing the shield connection has been tried.
I went over pretty good [which probably means I should do it again] the wiring and connections on my blackbird with the sickness, I also installed a foam bed under the ECU to no success. I did seem also to raise some eyebrows on that site because of the low milage [4,300]. As I think you mention, there's very little change in performance with the BB when the code sets; I've never caught it occur, only noticed it for looking at the cluster for other reasons.
Many on the STs, see a set of the fault at 4,000. Some on the BB see a set at 5,000. I've tried to set it on the center stand up to 10,000 rpm, and under load through 7,000 it has not set.
I've had at least one event where it set well below 3,500 rpm. When it is set, I think it might run a bit richer, and have a little less torque in the 6,500 plus, but I dunno.