If you look at forums for other Hondas, like the cb600 or Blackbirds, they also suffer from this issue, although, oddly enough, they state that the light comes on at 3000 RPM. They have also found no solid fix, but to replace the ECU. One claim that is interesting is that when the bike is left to sit for a while, the issue disappears for a while, but always comes back. This is not a sure thing, but it is mentioned more than a few times. Obviously, this is not scientific. It is also mentioned that a few places have claimed to be able to fix the issue with reprogramming, but all have come up empty. Although one company claims to have fixed the issue with Honda jetskis with reprogramming, but I am skeptical of that. It was mentioned before by Larry, i believe, that there are 2 ways to fix the problem with reprogramming. 1)Really fix the issue, if possible and 2) fix it so the light doesnt come on, and not fix the underlying problem. This is a very real possibility and I would be afraid of #2.
On one forum, a guy states that he cleaned the ECU terminals and applied dielectric grease to the terminals and hasnt had the issue in a couple of years. Again, that is not scientific and it was one person, so I wouldnt hold my breath. BUT, i mention this because it is literally free to try, with no downside. Side note: I have had this exact fix work on an early 2000's GM pickup when EVERYONE stated that there was no fix and a module change was necessary for an ABS pump issue. Dielectric grease in the connector fixed it. Just mentioned this to show that you just never know til you try.
As far as removing the potting material to inspect the innards of an ECU. I have twice removed potting material. Once, I boiled the component and once I steamed the part. One unit was a late 80's suspension levelling module from a GM car and the other was a Chrysler module of some sort. Potting material is epoxy resin and comes in many forms and compositions. I have heard that Honda uses some pretty durable stuff, so I hestate to say it would be a "Piece of cake" to remove it. But, if a person has one collecting dust, it may be worth a shot. Another issue with doing this is if you find and fix the issue, how do you re-pot the part, although I would think that would be the least of ones concerns.
Edit: forgot to add that the other thing I noticed in reading about this issue on other forums was that half the people stated that there seemed to be no degradation in performance when the light come on and half said there was a difference. Take from that what you will.